Good morning, dear community!
Today, I am installing Code Aster on the cluster, and I am facing some difficulties. After configuring the setup.cfg file, I have been able to make significant progress. However, I am encountering a conflict while installing the tfel software. Attached is the output.
-------------------------------------------------------------------------------
Checking for dependencies and required variables for 'tfel'... [ OK ]
--------------------------------------------------------------------------------
Installation of : tfel 3.2.1
MFront is a code generator which translates a set of
closely related domain specific languages into plain C++ on top of the
TFEL library.
Archive filename : tfel-3.2.1
Destination : /home/faguzzi.ifir/CA/public/tfel-3.2.1
Working directory : /tmp/install_tfel.23892
--------------------------------------------------------------------------------
Filling cache... [ OK ]
Checking permissions... [ OK ]
>>> Extraction <<<
entering directory '/tmp/install_tfel.23892'
Extracting tfel-3.2.1-1.tar.gz... [ OK ]
--- 7044 files extracted
leaving directory '/tmp/install_tfel.23892'
>>> Configuration <<<
entering directory '/tmp/install_tfel.23892/tfel-3.2.1'
Command line : mkdir build ; cd build ; cmake .. -DCMAKE_BUILD_TYPE=Release -DTFEL_SVN_REVISION=3.2.1 -DTFEL_APPEND_VERSION=3.2.1 -DCMAKE_Fortran_COMPILER=/opt/ohpc/pub/apps/software/intel-compilers/2022.1.0/compiler/2022.1.0/linux/bin/intel64/ifort -Dlocal-castem-header=ON -Denable-fortran=OFF -Denable-broken-boost-python-module-visibility-handling=ON -Denable-python-bindings=ON -Denable-cyrano=ON -Denable-aster=ON -Ddisable-reference-doc=ON -Ddisable-website=ON -Denable-portable-build=OFF -DPython_ADDITIONAL_VERSIONS=3.9 -Denable-python=ON -DPYTHON_EXECUTABLE=/opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/bin/python3 -DPYTHON_LIBRARY=/opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/lib/libpython3.9.so -DPYTHON_INCLUDE_DIR=/opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/include/python3.9 -DCMAKE_INSTALL_PREFIX=/home/faguzzi.ifir/CA/public/tfel-3.2.1
configure tfel installation...
Command output :
CMake Warning (dev) in CMakeLists.txt:
No project() command is present. The top-level CMakeLists.txt file must
contain a literal, direct call to the project() command. Add a line of
code such as
project(ProjectName)
near the top of the file, but after cmake_minimum_required().
CMake is pretending there is a "project(Project)" command on the first
line.
This warning is for project developers. Use -Wno-dev to suppress it.
-- The C compiler identification is Intel 2021.6.0.20220226
-- The CXX compiler identification is Intel 2021.6.0.20220226
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/ohpc/pub/apps/software/intel-compilers/2022.1.0/compiler/2022.1.0/linux/bin/intel64/icc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/ohpc/pub/apps/software/intel-compilers/2022.1.0/compiler/2022.1.0/linux/bin/intel64/icpc - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at CMakeLists.txt (cmake_minimum_required):
Compatibility with CMake < 2.8.12 will be removed from a future version of
CMake.
Update the VERSION argument value or use a ... suffix to tell
CMake that the project does not need compatibility with older versions.
CMake Deprecation Warning at CMakeLists.txt (cmake_policy):
The OLD behavior for policy CMP0005 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
CMake Deprecation Warning at CMakeLists.txt (cmake_policy):
The OLD behavior for policy CMP0026 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
CMake Deprecation Warning at CMakeLists.txt (cmake_policy):
The OLD behavior for policy CMP0053 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
-- Looking for include file fenv.h
-- Looking for include file fenv.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- fortran support disabled
-- flag 'Wall' disabled
-- flag '-diag-disable' disabled
-- flag 'xHost' disabled
-- flag 'ipo' disabled
-- flag 'fvisibility=hidden' disabled
-- flag 'fvisibility-inlines-hidden' disabled
-- enabling [[ noreturn ]] attribute
-- aster support enabled
-- cyrano support enabled
-- Could NOT find Gnuplot (missing: GNUPLOT_EXECUTABLE)
-- Found PythonLibs: /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/lib/libpython3.9.so (found version "3.9.6")
-- found python 3.9.6
-- python include path /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/include/python3.9
-- python libraries path /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/lib
-- python library python3.9
-- Found PythonInterp: /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/bin/python3 (found suitable version "3.9.6", minimum required is "3.9.6")
-- python interpreter /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/bin/python3
-- Trying to find libboost_python-py39
CMake Warning at /opt/ohpc/pub/apps/software/CMake/3.24.3-GCCcore-11.3.0/share/cmake-3.24/Modules/FindBoost.cmake (message):
No header defined for python-py39; skipping header check (note: header-only
libraries have no designated component)
Call Stack (most recent call first):
CMakeLists.txt (find_package)
CMake Warning at /opt/ohpc/pub/apps/software/CMake/3.24.3-GCCcore-11.3.0/share/cmake-3.24/Modules/FindBoost.cmake (message):
No header defined for numpy-py39; skipping header check (note: header-only
libraries have no designated component)
Call Stack (most recent call first):
CMakeLists.txt (find_package)
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python-py39 numpy-py39) (Required is at least version "1.36.0")
-- Trying to find libboost_python39
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python39 numpy39) (Required is at least version "1.36.0")
-- Trying to find libboost_python-py3
CMake Warning at /opt/ohpc/pub/apps/software/CMake/3.24.3-GCCcore-11.3.0/share/cmake-3.24/Modules/FindBoost.cmake (message):
No header defined for python-py3; skipping header check (note: header-only
libraries have no designated component)
Call Stack (most recent call first):
CMakeLists.txt (find_package)
CMake Warning at /opt/ohpc/pub/apps/software/CMake/3.24.3-GCCcore-11.3.0/share/cmake-3.24/Modules/FindBoost.cmake (message):
No header defined for numpy-py3; skipping header check (note: header-only
libraries have no designated component)
Call Stack (most recent call first):
CMakeLists.txt (find_package)
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python-py3 numpy-py3) (Required is at least version "1.36.0")
-- Trying to find libboost_python3
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python3 numpy3) (Required is at least version "1.36.0")
-- Trying to find libboost_python
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python numpy) (Required is at least version "1.36.0")
CMake Error at CMakeLists.txt (message):
Boost python libraries not found.
Required packages are :
-- Configuring incomplete, errors occurred!
See also "/tmp/install_tfel.23892/tfel-3.2.1/build/CMakeFiles/CMakeOutput.log".
See also "/tmp/install_tfel.23892/tfel-3.2.1/build/CMakeFiles/CMakeError.log".
EXIT_COMMAND_23892_00000070=1
configure tfel installation... [FAILED]
Exit code : 1
CMake Warning (dev) in CMakeLists.txt:
No project() command is present. The top-level CMakeLists.txt file must
contain a literal, direct call to the project() command. Add a line of
code such as
project(ProjectName)
near the top of the file, but after cmake_minimum_required().
CMake is pretending there is a "project(Project)" command on the first
line.
This warning is for project developers. Use -Wno-dev to suppress it.
-- The C compiler identification is Intel 2021.6.0.20220226
-- The CXX compiler identification is Intel 2021.6.0.20220226
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /opt/ohpc/pub/apps/software/intel-compilers/2022.1.0/compiler/2022.1.0/linux/bin/intel64/icc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /opt/ohpc/pub/apps/software/intel-compilers/2022.1.0/compiler/2022.1.0/linux/bin/intel64/icpc - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
CMake Deprecation Warning at CMakeLists.txt (cmake_minimum_required):
Compatibility with CMake < 2.8.12 will be removed from a future version of
CMake.
Update the VERSION argument value or use a ... suffix to tell
CMake that the project does not need compatibility with older versions.
CMake Deprecation Warning at CMakeLists.txt (cmake_policy):
The OLD behavior for policy CMP0005 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
CMake Deprecation Warning at CMakeLists.txt (cmake_policy):
The OLD behavior for policy CMP0026 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
CMake Deprecation Warning at CMakeLists.txt (cmake_policy):
The OLD behavior for policy CMP0053 will be removed from a future version
of CMake.
The cmake-policies(7) manual explains that the OLD behaviors of all
policies are deprecated and that a policy should be set to OLD only under
specific short-term circumstances. Projects should be ported to the NEW
behavior and not rely on setting a policy to OLD.
-- Looking for include file fenv.h
-- Looking for include file fenv.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- fortran support disabled
-- flag 'Wall' disabled
-- flag '-diag-disable' disabled
-- flag 'xHost' disabled
-- flag 'ipo' disabled
-- flag 'fvisibility=hidden' disabled
-- flag 'fvisibility-inlines-hidden' disabled
-- enabling [[ noreturn ]] attribute
-- aster support enabled
-- cyrano support enabled
-- Could NOT find Gnuplot (missing: GNUPLOT_EXECUTABLE)
-- Found PythonLibs: /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/lib/libpython3.9.so (found version "3.9.6")
-- found python 3.9.6
-- python include path /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/include/python3.9
-- python libraries path /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/lib
-- python library python3.9
-- Found PythonInterp: /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/bin/python3 (found suitable version "3.9.6", minimum required is "3.9.6")
-- python interpreter /opt/ohpc/pub/apps/software/Python/3.9.6-GCCcore-11.2.0/bin/python3
-- Trying to find libboost_python-py39
CMake Warning at /opt/ohpc/pub/apps/software/CMake/3.24.3-GCCcore-11.3.0/share/cmake-3.24/Modules/FindBoost.cmake (message):
No header defined for python-py39; skipping header check (note: header-only
libraries have no designated component)
Call Stack (most recent call first):
CMakeLists.txt (find_package)
CMake Warning at /opt/ohpc/pub/apps/software/CMake/3.24.3-GCCcore-11.3.0/share/cmake-3.24/Modules/FindBoost.cmake (message):
No header defined for numpy-py39; skipping header check (note: header-only
libraries have no designated component)
Call Stack (most recent call first):
CMakeLists.txt (find_package)
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python-py39 numpy-py39) (Required is at least version "1.36.0")
-- Trying to find libboost_python39
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python39 numpy39) (Required is at least version "1.36.0")
-- Trying to find libboost_python-py3
CMake Warning at /opt/ohpc/pub/apps/software/CMake/3.24.3-GCCcore-11.3.0/share/cmake-3.24/Modules/FindBoost.cmake (message):
No header defined for python-py3; skipping header check (note: header-only
libraries have no designated component)
Call Stack (most recent call first):
CMakeLists.txt (find_package)
CMake Warning at /opt/ohpc/pub/apps/software/CMake/3.24.3-GCCcore-11.3.0/share/cmake-3.24/Modules/FindBoost.cmake (message):
No header defined for numpy-py3; skipping header check (note: header-only
libraries have no designated component)
Call Stack (most recent call first):
CMakeLists.txt (find_package)
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python-py3 numpy-py3) (Required is at least version "1.36.0")
-- Trying to find libboost_python3
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python3 numpy3) (Required is at least version "1.36.0")
-- Trying to find libboost_python
-- Could NOT find Boost (missing: Boost_INCLUDE_DIR python numpy) (Required is at least version "1.36.0")
CMake Error at CMakeLists.txt (message):
Boost python libraries not found.
Required packages are :
-- Configuring incomplete, errors occurred!
See also "/tmp/install_tfel.23892/tfel-3.2.1/build/CMakeFiles/CMakeOutput.log".
See also "/tmp/install_tfel.23892/tfel-3.2.1/build/CMakeFiles/CMakeError.log".
EXIT_COMMAND_23892_00000070=1
*** Exception raised : error during configure
--------------------------------------------------------------------------------
I hope you can help me.
Thank you very much.
