AsterStudy + Salome 9.13...

mjb

Dear Colleagues,
how to integrate AsterStudy from singularity file (salome_meca-lgpl-2023.1.0-4-20240327) with Salome 9.13 platform.
Any suggestions?
Many thanks in advance.
Regards,
mjb

seirov

Hi, I am also interested!
What I have found out is that you can "mount" the .sif file, with the following command:
$ singularity build --sandbox sandbox/ salome_meca-lgpl-2023.1.0-4-20240327-scibian-10.sif
It creates a folder called 'sandbox' and you can browse inside, like a file system:

Then, you can find the salome_meca files in folder 'opt/salome_meca/'. And I haven't gone further...
I don't know how to extract the files from the .sif container, or which files. If you google a bit and go deeper, please post it, two brains think more than one 😉

linctus

1) Mount the container and get into it's shell
singularity run salome_meca-lgpl*****.sif shell
2) From salome shell copy ASTERSTUDY_202310 to somewhere in the host. For example
cp -r /opt/salome_meca/2023.1.0_scibian_univ/modules/ASTERSTUDY_202310/ ~/Downloads
3) Now in the host mv ASTERSTUDY_202310 to salome install dir. ($SALOME_ROOT_DIR is the top directory where you install salome and INSTALL is a subdirectory where the components are.
mv ~/Downloads/ASTERSTUDY_202310 $SALOME_ROOT_DIR/INSTALL/ASTERSTUDY
4) Register ASTERSTUDY as a module in salome launch script, say, $SALOME_ROOT_DIR/salome
context.setVariable(r"SALOME_MODULES", r"SHAPER,SHAPERSTUDY,GEOM,SMESH,ASTERSTUDY,PARAVIS,YACS,JOBMANAGER", overwrite=True) ........ ........ #[YDEFX] ........ ........ #[ASTER_STUDY] context.setVariable(r"ASTERSTUDY_ROOT_DIR", r"/home/wing/Apps/salome/INSTALL/ASTERSTUDY", overwrite=True) context.setVariable(r"ASTERSTUDY_SRC_DIR", r"/home/wing/Apps/salome/SOURCES/ASTERSTUDY", overwrite=True) context.addToPath(r"${ASTERSTUDY_ROOT_DIR}/bin") context.addToPath(r"${ASTERSTUDY_ROOT_DIR}/bin/salome") context.addToLdLibraryPath(r"${ASTERSTUDY_ROOT_DIR}/lib/salome") context.addToPythonPath(r"${ASTERSTUDY_ROOT_DIR}/bin/salome") context.addToPythonPath(r"${ASTERSTUDY_ROOT_DIR}/lib/salome") context.addToPythonPath(r"${ASTERSTUDY_ROOT_DIR}/${PYTHON_LIBDIR}") context.addToPythonPath(r"${ASTERSTUDY_ROOT_DIR}/${PYTHON_LIBDIR}/salome") context.addToPythonPath(r"${ASTERSTUDY_ROOT_DIR}/${PYTHON_LIBDIR}/asterstudy") context.appendVariable(r"SalomeAppConfig", r"${ASTERSTUDY_ROOT_DIR}/share/salome/resources/asterstudy", separator=":")

seirov

Hi linctus,

I have tried what you said, but it outputs:

context.setVariable(r"SALOME_MODULES", r"SHAPER,SHAPERSTUDY,GEOM,SMESH,ASTERSTUDY,PARAVIS,YACS,JOBMANAGER", overwrite=True)
IndentationError: unexpected unindent

Additionally, I noted that folder "$SALOME_ROOT_DIR/SOURCES/ASTERSTUDY" doesn't exist in the container, so the variable ASTERSTUDY_SRC_DIR is not set. Does it have any importance?

Thanks.

linctus

seirov
Python syntax is indentation sensitive. Take a look at the script and you will be familiar with that soon. For the line which raised the error message in your case the simplest way is to edit the original line with adding ASTERSTUDY to it while keeping anything else unchanged. I am using SALOME 9.12 and that line is line number 97. I changed it from

context.setVariable(r"SALOME_MODULES", r"SHAPER,SHAPERSTUDY,GEOM,SMESH,PARAVIS,YACS,JOBMANAGER", overwrite=True)

context.setVariable(r"SALOME_MODULES", r"SHAPER,SHAPERSTUDY,GEOM,SMESH,ASTERSTUDY,PARAVIS,YACS,JOBMANAGER", overwrite=True)

When it comes to #[ASTER_STUDY] section I put it just after #[YDEFX] section. Taking a look at #[YDEFX] section (or any other sections) you will be familiar with how to keep the right indentation soon.
ASTERSTUDY_SRC_DIR doesn't matter and you can delete it from the code.

seirov

Folks, I would like to share a success I have recently got! 😃
It is not directly the answer to the question in the thread, but somehow related. My goal was to couple salome + code aster (asterstudy) + code saturne, no matter the order. At the beginning, I managed to have salome_meca (salome + code aster) or salome + code saturne. Then I bumped into this thread to see if I could add asterstudy to the latter... without success. But it give me some tips to finally include code saturne into salome_meca, packed as singularity.
Details of the solution found at:
[https://www.code-saturne.org/forum/viewtopic.php?p=17795]

mjb

Dear Colleagues,
integration as above, Salome Meca from here:
https://code-aster.org/FICHIERS/singularity/salome_meca-lgpl-2024.1.0-1-20240327-scibian-11.sif
gave Aster Study in Salome menu:

but when I choose Aster Study I got:

then I can use Aster Study GUI normally:

but a study not start:

Below I listed all the message:

Traceback:
File "/home/mjb/apps/salome_913/BINARIES-CO7/ASTERSTUDY_202410/lib/python3.9/site-packages/asterstudy/gui/dashboard.py", line 423, in <lambda>
Q.QTimer.singleShot(50, lambda: self._runClicked(notid))

File "/home/mjb/apps/salome_913/BINARIES-CO7/ASTERSTUDY_202410/lib/python3.9/site-packages/asterstudy/gui/dashboard.py", line 452, in runClicked
self.runCase(run_case)

File "/home/mjb/apps/salome_913/BINARIES-CO7/ASTERSTUDY_202410/lib/python3.9/site-packages/asterstudy/gui/dashboard.py", line 473, in runCase
self.runner.start(case, debug_states=dbg)

File "/home/mjb/apps/salome_913/BINARIES-CO7/ASTERSTUDY_202410/lib/python3.9/site-packages/asterstudy/gui/dashboard.py", line 1057, in start
self._caserun[case].start()

File "/home/mjb/apps/salome_913/BINARIES-CO7/ASTERSTUDY_202410/lib/python3.9/site-packages/asterstudy/datamodel/engine/abstract_runner.py", line 137, in start
self.start_next()

File "/home/mjb/apps/salome_913/BINARIES-CO7/ASTERSTUDY_202410/lib/python3.9/site-packages/asterstudy/datamodel/engine/abstract_runner.py", line 146, in start_next
self.start_current()

File "/home/mjb/apps/salome_913/BINARIES-CO7/ASTERSTUDY_202410/lib/python3.9/site-packages/asterstudy/datamodel/engine/salome_runner.py", line 175, in start_current
prof = create_profil_for_current(None, self._case,

File "/home/mjb/apps/salome_913/BINARIES-CO7/ASTERSTUDY_202410/lib/python3.9/site-packages/asterstudy/datamodel/engine/engine_utils.py", line 251, in create_profil_for_current
from asrun import create_profil

As I can guess it is needed to integrate more than ASTERSTUDY_202410 folder

Regards,
mjb

niuniuaba

mjb

mjb As I can guess it is needed to integrate more than ASTERSTUDY_202410 folder

Sure. You need a working code_aster installation and register it in salome start script.
Say, my code_aster is installed in /home/wing/Apps/aster, and the code in salome script looks like:
#[code_aster] context.setVariable(r"ASTER_ROOT", r"/home/wing/Apps/aster", overwrite=True) context.addToPath(r"/home/wing/Apps/aster/bin") context.addToPythonPath(r"/home/wing/Apps/aster/lib/python${PYTHON_VERSION}/site-packages") context.addToPythonPath(r"/home/wing/Apps/aster/lib/python${PYTHON_VERSION}/site-packages/asrun") context.addToLdLibraryPath(r"/home/wing/Apps/aster/lib")
By the way, ASTERSTUDY in salome_meca sif image is based on Python 3.6.5 and if your SALOME 9.1* is using a different version of Python you may have to make some modifications in some ASTERSTUDY python scripts to make it works. Or, you can now compile a native ASTERSTUDY module using your system python. I think the source code of ASTERSTUDY is hosted at https://gitlab.com/salomemeca/modules/salome-asterstudy.git